GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3Q5E designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3Q5E_GDP_G_3850 | 77% | 41% | 0.139 | 0.979 | 1.06 | 1.21 | 1 | 4 | 1 | 0 | 100% | 1 |
| 3Q5E_GDP_E_3850 | 74% | 39% | 0.153 | 0.984 | 1.08 | 1.31 | 1 | 5 | 2 | 0 | 100% | 1 |
| 3Q5E_GDP_A_3850 | 73% | 38% | 0.145 | 0.972 | 0.97 | 1.45 | 2 | 4 | 2 | 0 | 100% | 1 |
| 3Q5E_GDP_C_3850 | 72% | 39% | 0.153 | 0.977 | 0.99 | 1.39 | 1 | 5 | 4 | 0 | 100% | 1 |
| 3Q5D_GDP_A_3850 | 98% | 40% | 0.053 | 0.972 | 0.96 | 1.37 | 2 | 6 | 1 | 0 | 100% | 1 |
| 4IDO_GDP_A_501 | 95% | 42% | 0.083 | 0.986 | 1 | 1.26 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6B9F_GDP_A_506 | 93% | 40% | 0.092 | 0.989 | 1.02 | 1.33 | 1 | 4 | 1 | 0 | 100% | 1 |
| 7OL3_GDP_A_501 | 93% | 23% | 0.088 | 0.983 | 1.14 | 2.02 | 2 | 9 | 0 | 0 | 100% | 1 |
| 4IDQ_GDP_D_501 | 91% | 40% | 0.099 | 0.984 | 1 | 1.34 | 1 | 5 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
