Ligand validation:7VPP

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 7VPP designated by the Author

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
7VPP_NAG_A_1005	49%	79%	0.151	0.897	0.37	0.5	-	-	0	0	100%	0.9333
7VPP_NAG_A_1006	38%	81%	0.193	0.896	0.28	0.54	-	-	0	0	100%	0.9333
7VPP_NAG_C_1004	38%	83%	0.217	0.918	0.27	0.51	-	-	0	0	100%	0.9333
7VPP_NAG_C_1005	23%	75%	0.232	0.857	0.37	0.6	-	1	0	0	100%	0.9333
7VPP_NAG_B_501	1%	72%	0.604	0.743	0.49	0.59	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5LG6_NAG_A_1006	87%	54%	0.069	0.939	0.46	1.28	-	1	0	0	100%	0.9333
4F5C_NAG_B_1012	84%	61%	0.065	0.924	0.56	0.92	-	-	0	0	100%	0.9333
4NZ8_NAG_A_1003	66%	47%	0.122	0.928	0.63	1.41	-	2	0	0	100%	0.9333
4NAQ_NAG_A_1003	62%	47%	0.157	0.949	0.36	1.64	-	5	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333
5U7O_NAG_B_704	100%	88%	0.024	0.989	0.23	0.44	-	-	0	0	100%	0.9333
6MUF_NAG_G_630	100%	77%	0.026	0.994	0.29	0.61	-	-	2	0	100%	0.9333
2C11_NAG_A_1734	100%	66%	0.027	0.989	0.67	0.63	-	-	4	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.