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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Morais-Cabral, J.H."

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Search Summary

This query matches 23 Structures.

Refinements

Structure Determination Methodology

experimental (23)

Scientific Name of Source Organism

	uncultured bacterium esnapd13 (5)
	Lentinula edodes (4)
	Mycolicibacterium smegmatis MC2 155 (4)
	Drosophila melanogaster (3)
	Mus musculus (2)
	Schizosaccharomyces pombe 972h- (2)
	Archaeoglobus fulgidus DSM 4304 (1)
	Danio rerio (1)
	Homo sapiens (1)

Taxonomy

	Eukaryota (13)
	Bacteria (9)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (22)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (23)

Refinement Resolution (Å)

	1.5 - 2.0 (5)
	2.0 - 2.5 (9)
	2.5 - 3.0 (6)
	3.0 - 3.5 (3)

Release Date

	2010 - 2014 (5)
	2015 - 2019 (4)
	2020 - 2024 (14)

Enzyme Classification Name

	Hydrolases (8)
	Lyases (4)
	Ligases (1)

Membrane Protein Annotation

	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Cyclic (9)
	Asymmetric (12)
	Dihedral (2)

SCOP Classification

	Alpha and beta proteins (a+b) (1)
	Artifacts (1)

AllSelected

1 to 23 of 23 Structures

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3NTH \| pdb_00003nth	Download File View File

Crystal structure of Tudor and Aubergine [R13(me2s)] complex

Liu, H.P., Huang, Y., Li, Z.Z., Gong, W.M., Xu, R.M.

(2010) Genes Dev 24: 1876-1881

Released	2010-09-15
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Drosophila melanogaster
Macromolecule	Maternal protein tudor (protein) peptide from Aubergine (protein)

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3NTI \| pdb_00003nti	Download File View File

Crystal structure of Tudor and Aubergine [R15(me2s)] complex

Liu, H.P., Huang, Y., Li, Z.Z., Gong, W.M., Xu, R.M.

(2010) Genes Dev 24: 1876-1881

Released	2010-09-15
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Drosophila melanogaster
Macromolecule	Maternal protein tudor (protein) peptide from Aubergine (protein)

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3NTK \| pdb_00003ntk	Download File View File

Crystal structure of Tudor

Liu, H.P., Huang, Y., Li, Z.Z., Gong, W.M., Xu, R.M.

(2010) Genes Dev 24: 1876-1881

Released	2010-09-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Drosophila melanogaster
Macromolecule	Maternal protein tudor (protein)

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4KK0 \| pdb_00004kk0	Download File View File

Crystal Structure of TSC1 core domain from S. pombe

Sun, W., Zhu, Y., Wang, Z.Z., Zhong, Q., Gao, F., Lou, J.Z., Gong, W.M., Xu, W.Q.

(2013) Nat Commun 4: 2135-2135

Released	2013-07-17
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Schizosaccharomyces pombe 972h-
Macromolecule	Tuberous sclerosis 1 protein homolog (protein)

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4KK1 \| pdb_00004kk1	Download File View File

Crystal Structure of TSC1 core domain from S. pombe

Sun, W., Zhu, Y., Wang, Z.Z., Zhong, Q., Gao, F., Lou, J.Z., Gong, W.M., Xu, W.Q.

(2013) Nat Commun 4: 2135-2135

Released	2013-07-17
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Schizosaccharomyces pombe 972h-
Macromolecule	Tuberous sclerosis 1 protein homolog (protein)

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4ORD \| pdb_00004ord	Download File View File

Crystal Structure of Zebra Fish Thioesterase Superfamily Member 2

Yu, S.S., Li, H., Gao, F., Xu, H., Gong, W.M.

To be published

Released	2015-02-11
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Danio rerio
Macromolecule	Thioesterase Superfamily Member 2 (protein)

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5ED8 \| pdb_00005ed8	Download File View File

Crystal structure of CC2-SUN of mouse SUN2

Nie, S., Ke, H.M., Gao, F., Ren, J.Q., Wang, M.Z., Huo, L., Gong, W.M., Feng, W.

(2016) Structure 24: 80-91

Released	2016-01-13
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	MKIAA0668 protein (protein)
Unique Ligands	MG

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5ED9 \| pdb_00005ed9	Download File View File

Crystal structure of CC1 of mouse SUN2

Nie, S., Ke, H.M., Gao, F., Ren, J.Q., Wang, M.Z., Huo, L., Gong, W.M., Feng, W.

(2016) Structure 24: 80-91

Released	2016-01-13
Method	X-RAY DIFFRACTION 2.009 Å
Organisms	Mus musculus
Macromolecule	SUN domain-containing protein 2 (protein)

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6AGG \| pdb_00006agg	Download File View File

Crystal structure of agmatine-AMPPCP-Mg complexed TiaS (tRNAIle2 agmatidine synthetase)

Dong, J.S., Gong, W.M.

(2018) J Mol Biology 430: 4183-4194

Released	2018-09-05
Method	X-RAY DIFFRACTION 2.706 Å
Organisms	Archaeoglobus fulgidus DSM 4304
Macromolecule	tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS (protein)
Unique Ligands	ACP, ACT, AG2, MG, NH4, ZN

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6JBS \| pdb_00006jbs	Download File View File

Bifunctional xylosidase/glucosidase LXYL

Gong, W.M., Yang, L.Y.

(2020) Commun Biol 3: 22-22

Released	2020-02-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Lentinula edodes
Macromolecule	Beta-D-xylosidase/beta-D-glucosidase (protein)
Unique Ligands	NAG, TRS
Unique branched monosaccharides	BMA, MAN, NAG

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6KJ0 \| pdb_00006kj0	Download File View File

Bifunctional xylosidase/glucosidase LXYL mutant E529Q C2221

Gong, W.M., Yang, L.Y.

(2020) Commun Biol 3: 22-22

Released	2020-02-26
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Lentinula edodes
Macromolecule	Beta-D-xylosidase/beta-D-glucosidase (protein)
Unique Ligands	BKR, NAG, XYP
Unique branched monosaccharides	BMA, MAN, NAG

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7EY1 \| pdb_00007ey1	Download File View File

Bifunctional xylosidase/glucosidase LXYL with intermediate substrate xylose

Gong, W.M., Yang, L.Y.

To be published

Released	2022-06-01
Method	X-RAY DIFFRACTION 2.46 Å
Organisms	Lentinula edodes
Macromolecule	Beta-D-xylosidase/beta-D-glucosidase (protein)
Unique Ligands	BKR, BMA, MAN, NAG, XYP, XYZ
Unique branched monosaccharides	BMA, MAN, NAG

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7EY2 \| pdb_00007ey2	Download File View File

Bifunctional xylosidase/glucosidase LXYL D300N mutant with intermediate substrate xylose

Gong, W.M., Yang, L.Y.

To be published

Released	2022-06-01
Method	X-RAY DIFFRACTION 2.43 Å
Organisms	Lentinula edodes
Macromolecule	Beta-D-xylosidase/beta-D-glucosidase (protein)
Unique Ligands	BMA, NAG, XYL, XYZ
Unique branched monosaccharides	BMA, MAN, NAG

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8G05 \| pdb_00008g05	Download File View File

Cryo-EM structure of an orphan GPCR-Gi protein signaling complex

Zhang, X., Wang, Y.J., Li, X., Liu, G.B., Gong, W.M., Zhang, C.

(2023) Nat Commun 14: 5706-5706

Released	2023-11-01
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens
Macromolecule	G-protein coupled receptor 84 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(i) subunit alpha-1 (protein) scFv16 (protein)
Unique Ligands	CLR, YI9

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8H7T \| pdb_00008h7t	Download File View File

Trans-3/4-proline-hydroxylase H11 apo structure

Gong, W.M., Hu, X.Y.

(2023) Acta Crystallogr D Struct Biol 79: 318-325

Released	2023-04-19
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	uncultured bacterium esnapd13
Macromolecule	Phytanoyl-CoA dioxygenase (protein)
Unique Ligands	CL

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8H7V \| pdb_00008h7v	Download File View File

Trans-3/4-proline-hydroxylase H11 with AKG

Gong, W.M., Hu, X.Y.

(2023) Acta Crystallogr D Struct Biol 79: 318-325

Released	2023-04-19
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	uncultured bacterium esnapd13
Macromolecule	Phytanoyl-CoA dioxygenase (protein)
Unique Ligands	AKG, FE

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8H7Y \| pdb_00008h7y	Download File View File

Trans-3/4-proline-hydroxylase H11 with AKG and L-proline

Gong, W.M., Hu, X.Y.

(2023) Acta Crystallogr D Struct Biol 79: 318-325

Released	2023-04-19
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	uncultured bacterium esnapd13
Macromolecule	Phytanoyl-CoA dioxygenase (protein)
Unique Ligands	AKG, FE, PRO

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8H81 \| pdb_00008h81	Download File View File

Trans-3/4-proline-hydroxylase H11 with 4-Hydroxyl-proline

Gong, W.M., Hu, X.Y.

(2023) Acta Crystallogr D Struct Biol 79: 318-325

Released	2023-04-19
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	uncultured bacterium esnapd13
Macromolecule	Phytanoyl-CoA dioxygenase (protein)
Unique Ligands	HYP

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8H85 \| pdb_00008h85	Download File View File

Trans-3/4-proline-hydroxylase H11 with 3-hydroxyl-proline

Gong, W.M., Hu, X.Y.

(2023) Acta Crystallogr D Struct Biol 79: 318-325

Released	2023-04-19
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	uncultured bacterium esnapd13
Macromolecule	Phytanoyl-CoA dioxygenase (protein)
Unique Ligands	HY3

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8IRK \| pdb_00008irk	Download File View File

Carbon Sulfoxide lyase

Gong, W.M., Wei, L.L., Liu, L.

(2024) J Biological Chem 300: 105539-105539

Released	2024-03-06
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Probable hercynylcysteine sulfoxide lyase (protein)
Unique Ligands	PLP, PYR

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8IRY \| pdb_00008iry	Download File View File

Carbon Sulfoxide lyase

Gong, W.M., Wei, L.L., Liu, L.

(2024) J Biological Chem 300: 105539-105539

Released	2024-03-06
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Probable hercynylcysteine sulfoxide lyase (protein)
Unique Ligands	PLP, PYR

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8IRZ \| pdb_00008irz	Download File View File

Carbon Sulfoxide lyase

Gong, W.M., Wei, L.L., Liu, L.

(2024) J Biological Chem 300: 105539-105539

Released	2024-03-06
Method	X-RAY DIFFRACTION 2.86 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Probable hercynylcysteine sulfoxide lyase (protein)
Unique Ligands	PLP

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8IS0 \| pdb_00008is0	Download File View File

Carbon Sulfoxide lyase - Y106F

Gong, W.M., Wei, L.L., Liu, L.

(2024) J Biological Chem 300: 105539-105539

Released	2024-03-06
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Probable hercynylcysteine sulfoxide lyase (protein)
Unique Ligands	DHA, PLP

1 to 23 of 23 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

3NTH | pdb_00003nth

3NTI | pdb_00003nti

3NTK | pdb_00003ntk

4KK0 | pdb_00004kk0

4KK1 | pdb_00004kk1

4ORD | pdb_00004ord

5ED8 | pdb_00005ed8

5ED9 | pdb_00005ed9

6AGG | pdb_00006agg

6JBS | pdb_00006jbs

6KJ0 | pdb_00006kj0

7EY1 | pdb_00007ey1

7EY2 | pdb_00007ey2

8G05 | pdb_00008g05

8H7T | pdb_00008h7t

8H7V | pdb_00008h7v

8H7Y | pdb_00008h7y

8H81 | pdb_00008h81

8H85 | pdb_00008h85

8IRK | pdb_00008irk

8IRY | pdb_00008iry

8IRZ | pdb_00008irz

8IS0 | pdb_00008is0