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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Song, Y.H."

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Search Summary

This query matches 22 Structures.

Refinements

Structure Determination Methodology

experimental (22)

Scientific Name of Source Organism

	Saccharomyces cerevisiae (16)
	Streptococcus agalactiae 2603V/R (2)
	Homo sapiens (1)
	Mycobacterium tuberculosis (1)
	Mycobacterium tuberculosis H37Rv (1)
	Mycolicibacterium smegmatis MC2 155 (1)
	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (1)

Taxonomy

	Eukaryota (17)
	Bacteria (5)
	Eukaryota (eukaryotes) (1)

Experimental Method

X-RAY DIFFRACTION (22)

Polymer Entity Type

Protein (22)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (4)
	1.5 - 2.0 (7)
	2.0 - 2.5 (7)
	2.5 - 3.0 (2)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (16)
	2010 - 2014 (5)

Enzyme Classification Name

Transferases (3)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (18)
	Cyclic (5)
	Dihedral (1)

SCOP Classification

	All beta proteins (12)
	Artifacts (10)
	All alpha proteins (3)
	Alpha and beta proteins (a+b) (2)

AllSelected

1 to 22 of 22 Structures

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1OOT \| pdb_00001oot	Download File View File

Crystal structure of the SH3 domain from a S. cerevisiae hypothetical 40.4 kDa protein at 1.39 A resolution

Kursula, P., Lehmann, F., Song, Y.H., Wilmanns, M.

To be published

Released	2004-04-06
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Hypothetical 40.4 kDa protein in PES4-HIS2 intergenic region (protein)
Unique Ligands	CL

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1RUW \| pdb_00001ruw	Download File View File

Crystal structure of the SH3 domain from S. cerevisiae Myo3

Kursula, P., Kursula, I., Lehmann, F., Song, Y.H., Wilmanns, M.

To be published

Released	2005-03-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Myosin-3 isoform (protein)
Unique Ligands	IMD

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1TG0 \| pdb_00001tg0	Download File View File

0.97-A structure of the SH3 domain of bbc1

Kursula, P., Kursula, I., Lehmann, F., Song, Y.H., Wilmanns, M.

To be published

Released	2005-06-14
Method	X-RAY DIFFRACTION 0.97 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Myosin tail region-interacting protein MTI1 (protein)

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1VA7 \| pdb_00001va7	Download File View File

Yeast Myo3 SH3 domain, triclinic crystal form

Kursula, P., Lehmann, F., Song, Y.H., Wilmanns, M.

To be published

Released	2005-06-14
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Myosin-3 isoform (protein)
Unique Ligands	GOL

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1WDX \| pdb_00001wdx	Download File View File

Yeast BBC1 SH3 domain, triclinic crystal form

Wilmanns, M., Consani Textor, L., Kursula, P., Kursula, I., Lehmann, F., Song, Y.H.

To be published

Released	2005-05-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Myosin tail region-interacting protein MTI1 (protein)

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1YN8 \| pdb_00001yn8	Download File View File

SH3 domain of yeast NBP2

Kursula, P., Kursula, I., Song, Y.H., Wilmanns, M.

To be published

Released	2006-05-30
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	NAP1-binding protein 2 (protein)
Unique Ligands	CA

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1YNZ \| pdb_00001ynz	Download File View File

SH3 domain of yeast Pin3

Kursula, P., Kursula, I., Zou, P., Lehmann, F., Song, Y.H., Wilmanns, M.

To be published

Released	2006-05-30
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Pin3p (protein)

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1Z9Z \| pdb_00001z9z	Download File View File

Crystal structure of yeast sla1 SH3 domain 3

Kursula, P., Kursula, I., Salmazo, A.P.T., Zou, P., Song, Y.H., Lehmann, F., Wilmanns, M.

To be published

Released	2006-04-25
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Cytoskeleton assembly control protein SLA1 (protein)
Unique Ligands	SO4

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1ZUK \| pdb_00001zuk	Download File View File

Yeast BBC1 Sh3 domain complexed with a peptide from Las17

Kursula, P., Kursula, I., Lehmann, F., Zou, P., Song, Y.H., Wilmanns, M.

To be published

Released	2006-08-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	Myosin tail region-interacting protein MTI1 (protein) Proline-rich protein LAS17 (protein)
Unique Ligands	CL, MG

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1ZUU \| pdb_00001zuu	Download File View File

Crystal structure of the yeast Bzz1 first SH3 domain at 0.97-A resolution

Kursula, P., Kursula, I., Lehmann, F., Zou, P., Song, Y.H., Wilmanns, M.

To be published

Released	2006-09-12
Method	X-RAY DIFFRACTION 0.97 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	BZZ1 protein (protein)
Unique Ligands	MG, UNX

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1ZX6 \| pdb_00001zx6	Download File View File

High-resolution crystal structure of yeast Pin3 SH3 domain

Kursula, P., Kursula, I., Lehmann, F., Zou, P., Song, Y.H., Wilmanns, M.

To be published

Released	2006-10-24
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Ypr154wp (protein)

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2A08 \| pdb_00002a08	Download File View File

Structure of the yeast YHH6 SH3 domain

Kursula, P., Kursula, I., Song, Y.H., Lehmann, F., Zou, P., Wilmanns, M.

To be published

Released	2006-06-27
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Hypothetical 41.8 kDa protein in SPO13-ARG4 intergenic region (protein)

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2A28 \| pdb_00002a28	Download File View File

Atomic-resolution crystal structure of the second SH3 domain of yeast Bzz1 determined from a pseudomerohedrally twinned crystal

Kursula, P., Kursula, I., Lehmann, F., Zou, P., Song, Y.H., Wilmanns, M.

To be published

Released	2006-09-12
Method	X-RAY DIFFRACTION 1.07 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	BZZ1 protein (protein)

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2V1Q \| pdb_00002v1q	Download File View File

Atomic-resolution structure of the yeast Sla1 SH3 domain 3

Kursula, I., Kursula, P., Zou, P., Lehmann, F., Song, Y.H., Wilmanns, M.

To be published

Released	2008-06-03
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOSKELETON ASSEMBLY CONTROL PROTEIN SLA1 (protein)
Unique Ligands	CL, NA, PT

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2V1R \| pdb_00002v1r	Download File View File

Yeast Pex13 SH3 domain complexed with a peptide from Pex14 at 2.1 A resolution

Kursula, I., Kursula, P., Lehmann, F., Zou, P., Song, Y.H., Wilmanns, M.

To be published

Released	2008-06-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PEROXISOMAL MEMBRANE PROTEIN PAS20 (protein) PEX14 (protein)

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2VKN \| pdb_00002vkn	Download File View File

YEAST SHO1 SH3 DOMAIN COMPLEXED WITH A PEPTIDE FROM PBS2

Kursula, P., Kursula, I., Song, Y.H., Paraskevopoulos, K., Wilmanns, M.

To be published

Released	2008-02-05
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	MAP KINASE KINASE PBS2 (protein) PROTEIN SSU81 (protein)
Unique Ligands	SO4

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2WL8 \| pdb_00002wl8	Download File View File

X-ray crystal structure of Pex19p

Schueller, N., Holton, S.J., Stanley, W.A., Song, Y.H., Konarev, P., Roessle, M., Erdmann, R., Schliebs, W., Wilmanns, M.

(2010) EMBO J 29: 2491

Released	2010-06-23
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	PEROXISOMAL BIOGENESIS FACTOR 19 (protein)

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3FAV \| pdb_00003fav	Download File View File

Structure of the CFP10-ESAT6 complex from Mycobacterium tuberculosis

Poulsen, C., Holton, S.J., Wilmanns, M., Song, Y.H.

(2014) PLoS One 9: e89313-e89313

Released	2009-11-24
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	6 kDa early secretory antigenic target (protein) ESAT-6-like protein esxB (protein)
Unique Ligands	IMD, ZN

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3GVM \| pdb_00003gvm	Download File View File

Structure of the homodimeric WXG-100 family protein from Streptococcus agalactiae

Poulsen, C., Gries, F., Wilmanns, M., Song, Y.H.

(2014) PLoS One 9: e89313-e89313

Released	2010-09-08
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Streptococcus agalactiae 2603V/R
Macromolecule	Putative uncharacterized protein SAG1039 (protein)

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3GWK \| pdb_00003gwk	Download File View File

Structure of the homodimeric WXG-100 family protein from Streptococcus agalactiae

Poulsen, C., Gries, F., Wilmanns, M., Song, Y.H.

(2014) PLoS One 9: e89313-e89313

Released	2010-09-08
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Streptococcus agalactiae 2603V/R
Macromolecule	Putative uncharacterized protein SAG1039 (protein)
Unique Ligands	SO4

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3GWM \| pdb_00003gwm	Download File View File

Crystal structure of the holo-[Acyl-Carrier-Protein] Synthase (ACPS) from Mycobacterium smegmatis

Poulsen, C., Wilmanns, M., Song, Y.H.

To be published

Released	2010-04-07
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Holo-[acyl-carrier-protein] synthase (protein)
Unique Ligands	SO4

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3H7Q \| pdb_00003h7q	Download File View File

Crystal structure of the holo-[Acyl-Carrier-Protein] Synthase (ACPS) from Mycobacterium tuberculosis

Poulsen, C., Wilmanns, M., Song, Y.H.

To be published

Released	2010-04-07
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Holo-[acyl-carrier-protein] synthase (protein)
Unique Ligands	BCN

1 to 22 of 22 Structures

Page 1 of 1

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1OOT | pdb_00001oot

1RUW | pdb_00001ruw

1TG0 | pdb_00001tg0

1VA7 | pdb_00001va7

1WDX | pdb_00001wdx

1YN8 | pdb_00001yn8

1YNZ | pdb_00001ynz

1Z9Z | pdb_00001z9z

1ZUK | pdb_00001zuk

1ZUU | pdb_00001zuu

1ZX6 | pdb_00001zx6

2A08 | pdb_00002a08

2A28 | pdb_00002a28

2V1Q | pdb_00002v1q

2V1R | pdb_00002v1r

2VKN | pdb_00002vkn

2WL8 | pdb_00002wl8

3FAV | pdb_00003fav

3GVM | pdb_00003gvm

3GWK | pdb_00003gwk

3GWM | pdb_00003gwm

3H7Q | pdb_00003h7q