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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "DeCaen, P.G."

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Search Summary

This query matches 29 Structures.

Refinements

Structure Determination Methodology

experimental (29)

Scientific Name of Source Organism

	Magnetococcus marinus MC-1 (25)
	Homo sapiens (4)

Taxonomy

	Bacteria (25)
	Eukaryota (4)

Experimental Method

	X-RAY DIFFRACTION (25)
	ELECTRON MICROSCOPY (4)

Polymer Entity Type

Protein (29)

Refinement Resolution (Å)

	2.0 - 2.5 (3)
	2.5 - 3.0 (14)
	3.0 - 3.5 (11)
	3.5 - 4.0 (1)

Release Date

	2010 - 2014 (12)
	2015 - 2019 (7)
	2020 - 2024 (8)
	2025 - 2029 (2)

Membrane Protein Annotation

	PDBTM (28)
	MemProtMD (27)
	mpstruc (24)
	OPM (10)

Symmetry Type

Cyclic (29)

AllSelected

1 to 25 of 29 Structures

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Explore in 3D

3ZJZ \| pdb_00003zjz	Download File View File

Open-form NavMS Sodium Channel Pore (with C-terminal Domain)

Bagneris, C., Naylor, C.E., Wallace, B.A.

(2013) Nat Commun 4: 2465

Released	2013-10-02
Method	X-RAY DIFFRACTION 2.92 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	ION TRANSPORT PROTEIN (protein)
Unique Ligands	12P, 2CV, NA

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4CBC \| pdb_00004cbc	Download File View File

Open-form NavMS Sodium Channel Pore (with C-terminal Domain) after thallium soak

Bagneris, C., Naylor, C.E., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428

Released	2014-05-28
Method	X-RAY DIFFRACTION 2.664 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	ION TRANSPORT PROTEIN (protein)
Unique Ligands	2CV, NA

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4OXS \| pdb_00004oxs	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	2CV, BR, NA

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4P2Z \| pdb_00004p2z	Download File View File

Structure of NavMS T207A/F214A

Bagneris, C., Naylor, C.E., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.08 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

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4P30 \| pdb_00004p30	Download File View File

Structure of NavMS mutant in presence of PI1 compound

Bagneris, C., Naylor, C.E., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.31 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

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4P9O \| pdb_00004p9o	Download File View File

Complex of Voltage-gated ion channel in a the presence of channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 2.89 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	2CV, BR

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4P9P \| pdb_00004p9p	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 2.91 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, BR, NA

Explore in 3D

4PA3 \| pdb_00004pa3	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, BR, NA

Explore in 3D

4PA4 \| pdb_00004pa4	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, BR, NA

Explore in 3D

4PA6 \| pdb_00004pa6	Download File View File

Structure of NavMS pore and C-terminal domain crystallised in the presence of channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.36 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

Explore in 3D

4PA7 \| pdb_00004pa7	Download File View File

Structure of NavMS pore and C-terminal domain crystallised in presence of channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

Explore in 3D

4PA9 \| pdb_00004pa9	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.43 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, BR

Explore in 3D

4X88 \| pdb_00004x88	Download File View File

E178D Selectivity filter mutant of NavMS voltage-gated pore

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2016) EMBO J 35: 820-830

Released	2016-02-24
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	1PE, 2CV, NA

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4X89 \| pdb_00004x89	Download File View File

NavMs voltage-gated sodium channal pore and C-terminal domain soaked with Silver nitrate

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2016) EMBO J 35: 820-830

Released	2016-03-09
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	1PE, 2CV, AG, NA

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4X8A \| pdb_00004x8a	Download File View File

NavMS pore and C-terminal domain grown from protein purified in LiCl

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2016) EMBO J 35: 820-830

Released	2016-03-09
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	2CV, 2PE, NA

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5BZB \| pdb_00005bzb	Download File View File

NavMs voltage-gated sodium channel pore and C-terminal domain

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2016) EMBO J 35: 820-830

Released	2016-02-24
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

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5HVD \| pdb_00005hvd	Download File View File

Full length Open-form Sodium Channel NavMs I218C

Sula, A., Booker, J.E., Naylor, C.E., Wallace, B.A.

(2017) Nat Commun 8: 14205-14205

Released	2017-03-01
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, MES, NA

Explore in 3D

5HVX \| pdb_00005hvx	Download File View File

Full length Wild-Type Open-form Sodium Channel NavMs

Sula, A., Booker, J.E., Naylor, C.E., Wallace, B.A.

(2017) Nat Commun 8: 14205-14205

Released	2017-03-01
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, EDO, MES, NA

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5T4D \| pdb_00005t4d	Download File View File

Cryo-EM structure of Polycystic Kidney Disease protein 2 (PKD2), residues 198-703

Shen, P.S., Yang, X., DeCaen, P.G., Liu, X., Bulkley, D., Clapham, D.E., Cao, E.

(2016) Cell 167: 763-773.e11

Released	2016-11-02
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens
Macromolecule	hPKD:198-703, Polycystin-2 (protein)
Unique Ligands	NAG

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6SX5 \| pdb_00006sx5	Download File View File

Full length Mutant Open-form Sodium Channel NavMs

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

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6SX7 \| pdb_00006sx7	Download File View File

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) (2.2 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, ME2, NA

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6SXC \| pdb_00006sxc	Download File View File

Crystal structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with 4-hydroxytamoxifen (2.5 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA, OHT

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6SXE \| pdb_00006sxe	Download File View File

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with Endoxifen (2.6 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	2CV, 7PG, 9XY, NA

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6SXF \| pdb_00006sxf	Download File View File

Crystal Structure of the Voltage-Gated Sodium Channel NavMs (F208L) in complex with Tamoxifen (2.8 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.839 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, CTX, NA

Explore in 3D

6SXG \| pdb_00006sxg	Download File View File

Crystal Structure of the Voltage-Gated Sodium Channel NavMs in complex with 4-hydroxytamoxifen (2.4 Angstrom resolution)

Sula, A., Hollingworth, D., Wallace, B.A.

(2021) Mol Cell 81: 1160

Released	2021-02-03
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA, OHT

1 to 25 of 29 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Membrane Protein Annotation

Symmetry Type

3ZJZ | pdb_00003zjz

4CBC | pdb_00004cbc

4OXS | pdb_00004oxs

4P2Z | pdb_00004p2z

4P30 | pdb_00004p30

4P9O | pdb_00004p9o

4P9P | pdb_00004p9p

4PA3 | pdb_00004pa3

4PA4 | pdb_00004pa4

4PA6 | pdb_00004pa6

4PA7 | pdb_00004pa7

4PA9 | pdb_00004pa9

4X88 | pdb_00004x88

4X89 | pdb_00004x89

4X8A | pdb_00004x8a

5BZB | pdb_00005bzb

5HVD | pdb_00005hvd

5HVX | pdb_00005hvx

5T4D | pdb_00005t4d

6SX5 | pdb_00006sx5

6SX7 | pdb_00006sx7

6SXC | pdb_00006sxc

6SXE | pdb_00006sxe

6SXF | pdb_00006sxf

6SXG | pdb_00006sxg