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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Larocque, R."

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Search Summary

This query matches 34 Structures.

Refinements

Structure Determination Methodology

experimental (34)

Scientific Name of Source Organism

	Escherichia coli (14)
	Zobellia galactanivorans (9)
	Thermotoga maritima (4)
	Formosa agariphila (2)
	Formosa agariphila KMM 3901 (2)
	Christiangramia forsetii KT0803 (1)
	Escherichia coli K-12 (1)
	Pseudoalteromonas carrageenovora (1)

Taxonomy

Bacteria (34)

Experimental Method

	X-RAY DIFFRACTION (32)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (34)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (8)
	2.0 - 2.5 (12)
	2.5 - 3.0 (7)

Release Date

	2000 - 2004 (18)
	2005 - 2009 (1)
	2015 - 2019 (12)
	2020 - 2024 (3)

Enzyme Classification Name

	Hydrolases (9)
	Transferases (10)
	Lyases (6)
	Oxidoreductases (5)
	Isomerases (4)

Symmetry Type

	Cyclic (20)
	Asymmetric (14)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (15)
	Alpha and beta proteins (a+b) (7)
	Artifacts (7)
	All beta proteins (5)

AllSelected

1 to 25 of 34 Structures

Page 1 of 2

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1FC4 \| pdb_00001fc4	Download File View File

2-AMINO-3-KETOBUTYRATE COA LIGASE

Schmidt, A., Matte, A., Li, Y., Sivaraman, J., Larocque, R., Schrag, J.D., Smith, C., Sauve, V., Cygler, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

(2001) Biochemistry 40: 5151-5160

Released	2001-05-02
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	2-AMINO-3-KETOBUTYRATE CONENZYME A LIGASE (protein)
Unique Ligands	AKB, PLP

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1FC5 \| pdb_00001fc5	Download File View File

CRYSTAL STRUCTURE OF MOLYBDOPTERIN BIOSYNTHESIS MOEA PROTEIN

Huang, W., Cygler, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

(2001) J Mol Biology 310: 419-431

Released	2001-07-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	MOLYBDOPTERIN BIOSYNTHESIS MOEA PROTEIN (protein)
Unique Ligands	MG

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1FG3 \| pdb_00001fg3	Download File View File

CRYSTAL STRUCTURE OF L-HISTIDINOL PHOSPHATE AMINOTRANSFERASE COMPLEXED WITH L-HISTIDINOL

Sivaraman, J., Cygler, M.

(2001) J Mol Biology 311: 761-776

Released	2001-08-22
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	HISTIDINOL PHOSPHATE AMINOTRANSFERASE (protein)
Unique Ligands	HSA, PLP

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1FG7 \| pdb_00001fg7	Download File View File

CRYSTAL STRUCTURE OF L-HISTIDINOL PHOSPHATE AMINOTRANSFERASE WITH PYRIDOXAL-5'-PHOSPHATE

Sivaraman, J., Cygler, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

(2001) J Mol Biology 311: 761-776

Released	2001-08-22
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli
Macromolecule	HISTIDINOL PHOSPHATE AMINOTRANSFERASE (protein)
Unique Ligands	PMP

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1GZ0 \| pdb_00001gz0	Download File View File

23S RIBOSOMAL RNA G2251 2'O-METHYLTRANSFERASE RLMB

Michel, G., Cygler, M.

(2002) Structure 10: 1303

Released	2002-10-17
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YJFH (protein)

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1H1C \| pdb_00001h1c	Download File View File

Histidinol-phosphate aminotransferase (HisC) from Thermotoga maritima

Vega, M.C., Fernandez, F.J., Wilmanns, M.

(2004) J Biological Chem 279: 21478

Released	2004-03-19
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Thermotoga maritima
Macromolecule	HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (protein)
Unique Ligands	PLP

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1IJI \| pdb_00001iji	Download File View File

Crystal Structure of L-Histidinol Phosphate Aminotransferase with PLP

Sivaraman, J., Li, Y., Larocque, R., Schrag, J.D., Cygler, M., Matte, A.

(2001) J Mol Biology 311: 761-776

Released	2001-08-29
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	Histidinol Phosphate Aminotransferase (protein)
Unique Ligands	PLP

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1K75 \| pdb_00001k75	Download File View File

The L-histidinol dehydrogenase (hisD) structure implicates domain swapping and gene duplication.

Barbosa, J.A.R.G., Sivaraman, J., Li, Y., Larocque, R., Matte, A., Schrag, J., Cygler, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

(2002) Proc Natl Acad Sci U S A 99: 1859-1864

Released	2002-02-27
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Escherichia coli
Macromolecule	L-histidinol dehydrogenase (protein)
Unique Ligands	GOL, SO4

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1KAE \| pdb_00001kae	Download File View File

L-HISTIDINOL DEHYDROGENASE (HISD) STRUCTURE COMPLEXED WITH L-HISTIDINOL (SUBSTRATE), ZINC AND NAD (COFACTOR)

Barbosa, J.A.R.G., Sivaraman, J., Li, Y., Larocque, R., Matte, A., Schrag, J.D., Cygler, M.

(2002) Proc Natl Acad Sci U S A 99: 1859-1864

Released	2002-06-12
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	Histidinol dehydrogenase (protein)
Unique Ligands	DTT, GOL, HSO, IMD, NAD, SO4, ZN

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1KAH \| pdb_00001kah	Download File View File

L-HISTIDINOL DEHYDROGENASE (HISD) STRUCTURE COMPLEXED WITH L-HISTIDINE (PRODUCT), ZN AND NAD (COFACTOR)

Barbosa, J.A.R.G., Sivaraman, J., Li, Y., Larocque, R., Matte, A., Schrag, J.D., Cygler, M.

(2002) Proc Natl Acad Sci U S A 99: 1859-1864

Released	2002-06-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	Histidinol dehydrogenase (protein)
Unique Ligands	HIS, ZN

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1KAR \| pdb_00001kar	Download File View File

L-HISTIDINOL DEHYDROGENASE (HISD) STRUCTURE COMPLEXED WITH HISTAMINE (INHIBITOR), ZINC AND NAD (COFACTOR)

Barbosa, J.A.R.G., Sivaraman, J., Li, Y., Larocque, R., Matte, A., Schrag, J.D., Cygler, M.

(2002) Proc Natl Acad Sci U S A 99: 1859-1864

Released	2002-06-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	Histidinol dehydrogenase (protein)
Unique Ligands	HSM, ZN

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1KSK \| pdb_00001ksk	Download File View File

STRUCTURE OF RSUA

Sivaraman, J., Sauve, V., Larocque, R., Stura, E.A., Schrag, J.D., Cygler, M., Matte, A.

(2002) Nat Struct Biol 9: 353-358

Released	2002-04-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	RIBOSOMAL SMALL SUBUNIT PSEUDOURIDINE SYNTHASE A (protein)
Unique Ligands	URA

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1KSL \| pdb_00001ksl	Download File View File

STRUCTURE OF RSUA

Sivaraman, J., Sauve, V., Larocque, R., Stura, E.A., Schrag, J.D., Cygler, M., Matte, A., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

(2002) Nat Struct Biol 9: 353-358

Released	2002-04-24
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	RIBOSOMAL SMALL SUBUNIT PSEUDOURIDINE SYNTHASE A (protein)
Unique Ligands	URA

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1KSV \| pdb_00001ksv	Download File View File

STRUCTURE OF RSUA

Sivaraman, J., Sauve, V., Larocque, R., Stura, E.A., Schrag, J.D., Cygler, M., Matte, A.

(2002) Nat Struct Biol 9: 353-358

Released	2002-04-24
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Escherichia coli
Macromolecule	RIBOSOMAL SMALL SUBUNIT PSEUDOURIDINE SYNTHASE A (protein)
Unique Ligands	U5P

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1P9K \| pdb_00001p9k	Download File View File

THE SOLUTION STRUCTURE OF YBCJ FROM E. COLI REVEALS A RECENTLY DISCOVERED ALFAL MOTIF INVOLVED IN RNA-BINDING

Volpon, L., Lievre, C., Osborne, M.J., Gandhi, S., Iannuzzi, P., Larocque, R., Matte, A., Cygler, M., Gehring, K., Ekiel, I., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

(2003) J Bacteriol 185: 4204-4210

Released	2003-11-25
Method	SOLUTION NMR
Organisms	Escherichia coli K-12
Macromolecule	orf, hypothetical protein (protein)

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1UU0 \| pdb_00001uu0	Download File View File

Histidinol-phosphate aminotransferase (HisC) from Thermotoga maritima (Apo-form)

Vega, M.C., Fernandez, F.J., Lehmann, F., Wilmanns, M.

(2004) J Biological Chem 279: 21478

Released	2004-05-13
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Thermotoga maritima
Macromolecule	HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (protein)
Unique Ligands	PO4

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1UU1 \| pdb_00001uu1	Download File View File

Complex of Histidinol-phosphate aminotransferase (HisC) from Thermotoga maritima (Apo-form)

Vega, M.C., Fernandez, F.J., Lehman, F., Wilmanns, M.

(2004) J Biological Chem 279: 21478

Released	2004-03-18
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Thermotoga maritima
Macromolecule	HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (protein)
Unique Ligands	HSA, PMP

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1UU2 \| pdb_00001uu2	Download File View File

Histidinol-phosphate aminotransferase (HisC) from Thermotoga maritima (apo-form)

Vega, M.C., Fernandez, F.J., Lehmann, F., Wilmanns, M.

(2004) J Biological Chem 279: 21478

Released	2004-03-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Thermotoga maritima
Macromolecule	HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (protein)
Unique Ligands	EDO, PMP

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2PQ4 \| pdb_00002pq4	Download File View File

NMR solution structure of NapD in complex with NapA1-35 signal peptide

Minailiuc, O.M., Ekiel, I., Milad, M., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

To be published

Released	2008-05-20
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	Periplasmic nitrate reductase precursor (protein) Protein napD (protein)

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4U6B \| pdb_00004u6b	Download File View File

Zg3597, a family 117 glycoside hydrolase, produced by the marine bacterium Zobellia galactanivorans

Ficko-Blean, E.

(2015) Acta Crystallogr D Biol Crystallogr 71: 209-223

Released	2015-02-11
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Zobellia galactanivorans
Macromolecule	Conserved hypothetical lipoprotein (protein)
Unique Ligands	ACY, CA, EDO, NA, PEG

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4U6D \| pdb_00004u6d	Download File View File

Zg3615, a family 117 glycoside hydrolase in complex with beta-3,6-anhydro-L-galactose

Ficko-Blean, E.

(2015) Acta Crystallogr D Biol Crystallogr 71: 209-223

Released	2015-02-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Zobellia galactanivorans
Macromolecule	Conserved hypothetical periplasmic protein (protein)
Unique Ligands	3DY, CA, EDO, PEG

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5FUI \| pdb_00005fui	Download File View File

Crystal structure of the C-terminal CBM6 of LamC a marine laminarianse from Zobellia galactanivorans

Labourel, A., Jam, M., Legentil, L., Sylla, B., Hehemann, J.H., Ficko-Blean, E., Ferrieres, V., Czjzek, M., Michel, G.

(2016) FEBS J 283: 1863

Released	2016-03-02
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Zobellia galactanivorans
Macromolecule	ENDO-1,3-BETA-GLUCANASE, FAMILY GH16 (protein)
Unique Ligands	APY, GOL, MG

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5OCQ \| pdb_00005ocq	Download File View File

Crystal structure of the complex of the kappa-carrageenase from Pseudoalteromonas carrageenovora with an oligotetrasaccharide of kappa-carrageenan

Czjzek, M., Leroux, C., Bernard, T., Matard-Mann, M., Jeudy, A., Michel, G.

(2017) J Biological Chem 292: 19919-19934

Released	2017-10-18
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pseudoalteromonas carrageenovora
Macromolecule	Kappa-carrageenase (protein)
Unique Ligands	CIT
Unique branched monosaccharides	9RN, G4S