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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = 2CV

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Search Summary

This query matches 45 Structures.

Refinements

Structure Determination Methodology

experimental (45)

Scientific Name of Source Organism

	Magnetococcus marinus MC-1 (28)
	Meleagris gallopavo (16)
	Escherichia coli K-12 (6)
	Lama glama (6)
	Homo sapiens (1)

Taxonomy

	Bacteria (34)
	Eukaryota (17)

Experimental Method

X-RAY DIFFRACTION (45)

Polymer Entity Type

Protein (45)

Refinement Resolution (Å)

	2.0 - 2.5 (8)
	2.5 - 3.0 (24)
	3.0 - 3.5 (12)
	3.5 - 4.0 (1)

Release Date

	2010 - 2014 (22)
	2015 - 2019 (13)
	2020 - 2024 (10)

Enzyme Classification Name

Oxidoreductases (1)

Membrane Protein Annotation

	PDBTM (44)
	MemProtMD (42)
	mpstruc (35)
	OPM (12)

Symmetry Type

	Cyclic (33)
	Asymmetric (17)

SCOP Classification

	Artifacts (9)
	Membrane and cell surface proteins and peptides (9)
	All beta proteins (6)
	Alpha and beta proteins (a/b) (5)

AllSelected

1 to 25 of 45 Structures

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Explore in 3D

2Y00 \| pdb_00002y00	Download File View File

TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB92)

Warne, A., Moukhametzianov, R., Baker, J.G., Nehme, R., Edwards, P.C., Leslie, A.G.W., Schertler, G.F.X., Tate, C.G.

(2011) Nature 469: 241

Released	2011-01-12
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, NA, Y00, Y01

Explore in 3D

2Y01 \| pdb_00002y01	Download File View File

TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB102)

Warne, A., Moukhametzianov, R., Baker, J.G., Nehme, R., Edwards, P.C., Leslie, A.G.W., Schertler, G.F.X., Tate, C.G.

(2011) Nature 469: 241

Released	2011-03-30
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, Y00, Y01

Explore in 3D

2Y02 \| pdb_00002y02	Download File View File

TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND AGONIST CARMOTEROL

Warne, A., Moukhametzianov, R., Baker, J.G., Nehme, R., Edwards, P.C., Leslie, A.G.W., Schertler, G.F.X., Tate, C.G.

(2011) Nature 469: 241

Released	2011-01-12
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, NA, WHJ, Y01

Explore in 3D

2Y03 \| pdb_00002y03	Download File View File

TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND AGONIST ISOPRENALINE

Warne, A., Moukhametzianov, R., Baker, J.G., Nehme, R., Edwards, P.C., Leslie, A.G.W., Schertler, G.F.X., Tate, C.G.

(2011) Nature 469: 241

Released	2011-01-12
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, 5FW, NA, Y01

Explore in 3D

2Y04 \| pdb_00002y04	Download File View File

TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND PARTIAL AGONIST SALBUTAMOL

Warne, A., Moukhametzianov, R., Baker, J.G., Nehme, R., Edwards, P.C., Leslie, A.G.W., Schertler, G.F.X., Tate, C.G.

(2011) Nature 469: 241

Released	2011-01-12
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, 68H, NA, Y01

Explore in 3D

2YCW \| pdb_00002ycw	Download File View File

TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND ANTAGONIST CARAZOLOL

Moukhametzianov, R., Warne, T., Edwards, P.C., Serrano-Vega, M.J., Leslie, A.G.W., Tate, C.G., Schertler, G.F.X.

(2011) Proc Natl Acad Sci U S A 108: 8228

Released	2011-06-01
Method	X-RAY DIFFRACTION 3 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, CAU, NA

Explore in 3D

3ZJZ \| pdb_00003zjz	Download File View File

Open-form NavMS Sodium Channel Pore (with C-terminal Domain)

Bagneris, C., Naylor, C.E., Wallace, B.A.

(2013) Nat Commun 4: 2465

Released	2013-10-02
Method	X-RAY DIFFRACTION 2.92 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	ION TRANSPORT PROTEIN (protein)
Unique Ligands	12P, 2CV, NA

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3ZPQ \| pdb_00003zpq	Download File View File

Thermostabilised turkey beta1 adrenergic receptor with 4-(piperazin-1- yl)-1H-indole bound (compound 19)

Christopher, J.A., Congreve, M., Dore, A.S., Marshall, F.H., Myszka, D.G., Brown, J., Koglin, M., Tehan, B., Errey, J.C., Tate, C.G., Warne, T.

(2013) J Med Chem 56: 3446

Released	2013-04-03
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, NA, XF5, Y01

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3ZPR \| pdb_00003zpr	Download File View File

Thermostabilised turkey beta1 adrenergic receptor with 4-methyl-2-(piperazin-1-yl) quinoline bound

Christopher, J.A., Congreve, M., Dore, A.S., Marshall, F.H., Myszka, D.G., Brown, J., Koglin, M., Tehan, B., Errey, J.C., Tate, C.G., Warne, T.

(2013) J Med Chem 56: 3446

Released	2013-04-03
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, 3WC, NA, Y01

Explore in 3D

4AMI \| pdb_00004ami	Download File View File

Turkey beta1 adrenergic receptor with stabilising mutations and bound biased agonist bucindolol

Warne, T., Edwards, P.C., Leslie, A.G., Tate, C.G.

(2012) Structure 20: 841

Released	2012-05-23
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, G90

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4AMJ \| pdb_00004amj	Download File View File

Turkey beta1 adrenergic receptor with stabilising mutations and bound biased agonist carvedilol

Warne, T., Edwards, P.C., Leslie, A.G., Tate, C.G.

(2012) Structure 20: 841

Released	2012-05-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Meleagris gallopavo
Macromolecule	BETA-1 ADRENERGIC RECEPTOR (protein)
Unique Ligands	2CV, CVD, NA

Explore in 3D

4CBC \| pdb_00004cbc	Download File View File

Open-form NavMS Sodium Channel Pore (with C-terminal Domain) after thallium soak

Bagneris, C., Naylor, C.E., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428

Released	2014-05-28
Method	X-RAY DIFFRACTION 2.664 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	ION TRANSPORT PROTEIN (protein)
Unique Ligands	2CV, NA

Explore in 3D

4OXS \| pdb_00004oxs	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	2CV, BR, NA

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4P2Z \| pdb_00004p2z	Download File View File

Structure of NavMS T207A/F214A

Bagneris, C., Naylor, C.E., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.08 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

Explore in 3D

4P30 \| pdb_00004p30	Download File View File

Structure of NavMS mutant in presence of PI1 compound

Bagneris, C., Naylor, C.E., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.31 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

Explore in 3D

4P9O \| pdb_00004p9o	Download File View File

Complex of Voltage-gated ion channel in a the presence of channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 2.89 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	2CV, BR

Explore in 3D

4P9P \| pdb_00004p9p	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 2.91 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, BR, NA

Explore in 3D

4PA3 \| pdb_00004pa3	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, BR, NA

Explore in 3D

4PA4 \| pdb_00004pa4	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, BR, NA

Explore in 3D

4PA6 \| pdb_00004pa6	Download File View File

Structure of NavMS pore and C-terminal domain crystallised in the presence of channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.36 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

Explore in 3D

4PA7 \| pdb_00004pa7	Download File View File

Structure of NavMS pore and C-terminal domain crystallised in presence of channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, NA

Explore in 3D

4PA9 \| pdb_00004pa9	Download File View File

Structure of NavMS in complex with channel blocking compound

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2014) Proc Natl Acad Sci U S A 111: 8428-8433

Released	2014-06-04
Method	X-RAY DIFFRACTION 3.43 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	12P, 2CV, BR

Explore in 3D

4X88 \| pdb_00004x88	Download File View File

E178D Selectivity filter mutant of NavMS voltage-gated pore

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2016) EMBO J 35: 820-830

Released	2016-02-24
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	1PE, 2CV, NA

Explore in 3D

4X89 \| pdb_00004x89	Download File View File

NavMs voltage-gated sodium channal pore and C-terminal domain soaked with Silver nitrate

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2016) EMBO J 35: 820-830

Released	2016-03-09
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	1PE, 2CV, AG, NA

Explore in 3D

4X8A \| pdb_00004x8a	Download File View File

NavMS pore and C-terminal domain grown from protein purified in LiCl

Naylor, C.E., Bagneris, C., Wallace, B.A.

(2016) EMBO J 35: 820-830

Released	2016-03-09
Method	X-RAY DIFFRACTION 3.02 Å
Organisms	Magnetococcus marinus MC-1
Macromolecule	Ion transport protein (protein)
Unique Ligands	2CV, 2PE, NA

1 to 25 of 45 Structures

Page 1 of 2

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2Y00 | pdb_00002y00

2Y01 | pdb_00002y01

2Y02 | pdb_00002y02

2Y03 | pdb_00002y03

2Y04 | pdb_00002y04

2YCW | pdb_00002ycw

3ZJZ | pdb_00003zjz

3ZPQ | pdb_00003zpq

3ZPR | pdb_00003zpr

4AMI | pdb_00004ami

4AMJ | pdb_00004amj

4CBC | pdb_00004cbc

4OXS | pdb_00004oxs

4P2Z | pdb_00004p2z

4P30 | pdb_00004p30

4P9O | pdb_00004p9o

4P9P | pdb_00004p9p

4PA3 | pdb_00004pa3

4PA4 | pdb_00004pa4

4PA6 | pdb_00004pa6

4PA7 | pdb_00004pa7

4PA9 | pdb_00004pa9

4X88 | pdb_00004x88

4X89 | pdb_00004x89

4X8A | pdb_00004x8a