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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = HTG

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Search Summary

This query matches 65 Structures.

Refinements

Structure Determination Methodology

experimental (65)

Scientific Name of Source Organism

	Thermostichus vulcanus (40)
	Bos taurus (5)
	Thermosynechococcus vestitus BP-1 (5)
	Escherichia coli K-12 (4)
	Rhodobacter capsulatus (4)
	Bacillus subtilis (3)
	Pisum sativum (2)
	Trichoderma reesei (2)
	Acetobacterium woodii DSM 1030 (1)
	Bryopsis corticulans (1)

More...

Taxonomy

	Bacteria (53)
	Eukaryota (12)

Experimental Method

	X-RAY DIFFRACTION (61)
	ELECTRON MICROSCOPY (4)

Polymer Entity Type

Protein (65)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (10)
	2.0 - 2.5 (41)
	2.5 - 3.0 (10)
	3.0 - 3.5 (3)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (12)
	2010 - 2014 (7)
	2015 - 2019 (19)
	2020 - 2024 (26)

Enzyme Classification Name

	Oxidoreductases (55)
	Transferases (1)

Membrane Protein Annotation

	PDBTM (55)
	mpstruc (26)
	MemProtMD (26)
	OPM (14)

Symmetry Type

	Asymmetric (56)
	Cyclic (10)

SCOP Classification

	Membrane and cell surface proteins and peptides (32)
	All alpha proteins (26)
	Artifacts (8)
	All beta proteins (8)
	Alpha and beta proteins (a+b) (2)
	Alpha and beta proteins (a/b) (4)

AllSelected

1 to 25 of 65 Structures

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1U19 \| pdb_00001u19	Download File View File

Crystal Structure of Bovine Rhodopsin at 2.2 Angstroms Resolution

Okada, T., Sugihara, M., Bondar, A.N., Elstner, M., Entel, P., Buss, V.

(2004) J Mol Biology 342: 571-583

Released	2004-10-12
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bos taurus
Macromolecule	Rhodopsin (protein)
Unique Ligands	HG, HTG, HTO, PLM, RET, ZN
Unique branched monosaccharides	BMA, MAN, NAG

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2BGI \| pdb_00002bgi	Download File View File

X-Ray Structure of the Ferredoxin-NADP(H) Reductase from Rhodobacter capsulatus complexed with three molecules of the detergent n-heptyl- beta-D-thioglucoside at 1.7 Angstroms

Perez-Dorado, J.I., Hermoso, J.A., Nogues, I., Frago, S., Bittel, C., Mayhew, S.G., Gomez-Moreno, C., Medina, M., Cortez, N., Carrillo, N.

(2005) Biochemistry 44: 11730

Released	2005-09-07
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Rhodobacter capsulatus
Macromolecule	FERREDOXIN-NADP(H) REDUCTASE (protein)
Unique Ligands	CO2, FAD, HTG, SO4

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2G87 \| pdb_00002g87	Download File View File

Crystallographic model of bathorhodopsin

Nakamichi, H., Okada, T.

(2006) Angew Chem Int Ed Engl 45: 4270-4273

Released	2006-09-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bos taurus
Macromolecule	Rhodopsin (protein)
Unique Ligands	HG, HTG, HTO, PLM, RET, ZN
Unique branched monosaccharides	BMA, MAN, NAG

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2HPY \| pdb_00002hpy	Download File View File

Crystallographic model of lumirhodopsin

Nakamichi, H., Okada, T.

(2006) Proc Natl Acad Sci U S A 103: 12729-12734

Released	2006-08-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Bos taurus
Macromolecule	Rhodopsin (protein)
Unique Ligands	HG, HTG, HTO, PLM, RET, ZN
Unique branched monosaccharides	BMA, MAN, NAG

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2PED \| pdb_00002ped	Download File View File

Crystallographic model of 9-cis-rhodopsin

Nakamichi, H., Okada, T.

(2007) Biophys J 92: L106-L108

Released	2007-10-30
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Bos taurus
Macromolecule	Rhodopsin (protein)
Unique Ligands	HG, HTG, HTO, PLM, RET, ZN
Unique branched monosaccharides	BMA, MAN, NAG

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2PL6 \| pdb_00002pl6	Download File View File

Monoclinic crystal structure of hydrophobin HFBII in presence of a detergent

Kallio, J.M., Rouvinen, J.P.

(2007) J Biological Chem 282: 28733-28739

Released	2007-07-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Trichoderma reesei
Macromolecule	Hydrophobin-2 (protein)
Unique Ligands	HTG

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2PL7 \| pdb_00002pl7	Download File View File

Orhorhombic crystal structure of hydrophobin HFBII in the presence of a detergent

Kallio, J.M., Rouvinen, J.P.

(2007) J Biological Chem 282: 28733-28739

Released	2007-07-17
Method	X-RAY DIFFRACTION 1 Å
Organisms	Trichoderma reesei
Macromolecule	Hydrophobin-2 (protein)
Unique Ligands	HTG, SO4

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2VNH \| pdb_00002vnh	Download File View File

X-RAY STRUCTURE OF THE FERREDOXIN-NADP(H) REDUCTASE FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH NADP. FORM II AT 2.27 ANGSTROMS RESOLUTION

Perez-Dorado, I., Hermoso, J.A.

(2009) Biochim Biophys Acta 1794: 199

Released	2008-11-11
Method	X-RAY DIFFRACTION 2.27 Å
Organisms	Rhodobacter capsulatus
Macromolecule	NADPH\:FERREDOXIN REDUCTASE (protein)
Unique Ligands	FAD, HTG, NAP

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2VNI \| pdb_00002vni	Download File View File

X-RAY STRUCTURE OF THE FERREDOXIN-NADP(H) REDUCTASE FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH 2P-AMP AT 2.37 ANGSTROMS RESOLUTION

Perez-Dorado, I., Hermoso, J.A.

(2009) Biochim Biophys Acta 1794: 199

Released	2008-11-11
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Rhodobacter capsulatus
Macromolecule	NADPH\:FERREDOXIN REDUCTASE (protein)
Unique Ligands	A2P, FAD, HTG

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2VNJ \| pdb_00002vnj	Download File View File

X-RAY STRUCTURE OF THE FERREDOXIN-NADP(H) REDUCTASE FROM RHODOBACTER CAPSULATUS IN COMPLEX WITH NADP. FORM I AT 2.13 ANGSTROMS RESOLUTION

Perez-Dorado, I., Hermoso, J.A.

(2009) Biochim Biophys Acta 1794: 199

Released	2008-11-11
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Rhodobacter capsulatus
Macromolecule	NADPH\:FERREDOXIN REDUCTASE (protein)
Unique Ligands	FAD, HTG, NAP

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3EJB \| pdb_00003ejb	Download File View File

Crystal Structure of P450BioI in complex with tetradecanoic acid ligated Acyl Carrier Protein

Cryle, M.J., Schlichting, I.

(2008) Proc Natl Acad Sci U S A 105: 15696-15701

Released	2008-10-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacillus subtilis Escherichia coli K-12
Macromolecule	Acyl carrier protein (protein) Biotin biosynthesis cytochrome P450-like enzyme (protein)
Unique Ligands	CL, HEM, HTG, ZMP

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3EJD \| pdb_00003ejd	Download File View File

Crystal Structure of P450BioI in complex with hexadec-9Z-enoic acid ligated Acyl Carrier Protein

Cryle, M.J., Schlichting, I.

(2008) Proc Natl Acad Sci U S A 105: 15696-15701

Released	2008-10-07
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bacillus subtilis Escherichia coli K-12
Macromolecule	Acyl carrier protein (protein) Biotin biosynthesis cytochrome P450-like enzyme (protein)
Unique Ligands	CL, HEM, HTG, ZMQ

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3EJE \| pdb_00003eje	Download File View File

Crystal Structure of P450BioI in complex with octadec-9Z-enoic acid ligated Acyl Carrier Protein

Cryle, M.J., Schlichting, I.

(2008) Proc Natl Acad Sci U S A 105: 15696-15701

Released	2008-10-07
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bacillus subtilis Escherichia coli K-12
Macromolecule	Acyl carrier protein (protein) Biotin biosynthesis cytochrome P450-like enzyme (protein)
Unique Ligands	HEM, HTG, ZMO

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3OAX \| pdb_00003oax	Download File View File

Crystal structure of bovine rhodopsin with beta-ionone

Makino, C.L., Riley, C.K., Looney, J., Crouch, R.K., Okada, T.

(2010) Biophys J 99: 2366-2373

Released	2011-01-19
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bos taurus
Macromolecule	Rhodopsin (protein)
Unique Ligands	4E6, HG, HTG, HTO, ID3, PLM, RET, ZN
Unique branched monosaccharides	BMA, MAN, NAG

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3PL9 \| pdb_00003pl9	Download File View File

Crystal structure of spinach minor light-harvesting complex CP29 at 2.80 angstrom resolution

Pan, X.W., Li, M., Wan, T., Wang, L.F., Jia, C.J., Hou, Z.Q., Zhao, X.L., Zhang, J.P., Chang, W.R.

(2011) Nat Struct Mol Biol 18: 309-315

Released	2011-02-09
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Spinacia oleracea
Macromolecule	Chlorophyll A-B binding protein (protein)
Unique Ligands	CHL, CLA, G3P, HTG, LUT, NEX, XAT

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3WU2 \| pdb_00003wu2	Download File View File

Crystal structure analysis of Photosystem II complex

Umena, Y., Kawakami, K., Shen, J.R., Kamiya, N.

(2011) Nature 473: 55-60

Released	2014-09-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 19
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, RRX, SO4, SQD, UNL

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4BEM \| pdb_00004bem	Download File View File

Crystal structure of the F-type ATP synthase c-ring from Acetobacterium woodii.

Matthies, D., Meier, T., Yildiz, O.

(2014) Nat Commun 5: 5286

Released	2014-03-26
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Acetobacterium woodii DSM 1030
Macromolecule	F1FO ATPASE C1 SUBUNIT (protein) F1FO ATPASE C2 SUBUNIT (protein)
Unique Ligands	ACT, HTG, MN, NA, P6G, TAM

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4IL6 \| pdb_00004il6	Download File View File

Structure of Sr-substituted photosystem II

Koua, F.H.M., Umena, Y., Kawakami, K., Kamiya, N., Shen, J.R.

(2013) Proc Natl Acad Sci U S A 110: 3889-3894

Released	2013-03-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermostichus vulcanus Thermosynechococcus vestitus BP-1
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CL, CLA, DGD, DMS, FE2, GOL, HEM, HTG, LHG, LMG, LMT, MG, OER, PHO, PL9, SQD, UNL

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4UB6 \| pdb_00004ub6	Download File View File

Native structure of photosystem II (dataset-1) by a femtosecond X-ray laser

Suga, M., Akita, F., Hirata, K., Ueno, G., Murakami, H., Nakajima, Y., Shimizu, T., Yamashita, K., Yamamoto, M., Ago, H., Shen, J.R.

(2015) Nature 517: 99-103

Released	2014-12-03
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

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4UB8 \| pdb_00004ub8	Download File View File

Native structure of photosystem II (dataset-2) by a femtosecond X-ray laser

Suga, M., Akita, F., Hirata, K., Ueno, G., Murakami, H., Nakajima, Y., Shimizu, T., Yamashita, K., Yamamoto, M., Ago, H., Shen, J.R.

(2015) Nature 517: 99-103

Released	2014-12-03
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

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4XK8 \| pdb_00004xk8	Download File View File

Crystal structure of plant photosystem I-LHCI super-complex at 2.8 angstrom resolution

Suga, M., Qin, X., Kuang, T., Shen, J.R.

(2015) Science 348: 989-995

Released	2015-06-10
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Pisum sativum
Macromolecule	Unique protein chains: 16
Unique Ligands	BCR, CHL, CLA, DGD, HTG, LHG, LMG, LMT, LUT, PQN, SF4, XAT

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5B5E \| pdb_00005b5e	Download File View File

Crystal structure analysis of Photosystem II complex

Tanaka, A., Fukushima, Y., Kamiya, N.

(2017) J Am Chem Soc 139: 1718-1721

Released	2017-02-01
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 19
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, DMS, FE2, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, RRX, SQD, UNL

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5B66 \| pdb_00005b66	Download File View File

Crystal structure analysis of Photosystem II complex

Tanaka, A., Fukushima, Y., Kamiya, N.

(2017) J Am Chem Soc 139: 1718-1721

Released	2017-02-01
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 19
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, DMS, FE2, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, RRX, SQD, UNL

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5GTH \| pdb_00005gth	Download File View File

Native XFEL structure of photosystem II (dark dataset)

Suga, M., Shen, J.R.

(2017) Nature 543: 131-135

Released	2017-03-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

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5GTI \| pdb_00005gti	Download File View File

Native XFEL structure of photosystem II (two flash dataset)

Suga, M., Shen, J.R.

(2017) Nature 543: 131-135

Released	2017-03-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

1 to 25 of 65 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1U19 | pdb_00001u19

2BGI | pdb_00002bgi

2G87 | pdb_00002g87

2HPY | pdb_00002hpy

2PED | pdb_00002ped

2PL6 | pdb_00002pl6

2PL7 | pdb_00002pl7

2VNH | pdb_00002vnh

2VNI | pdb_00002vni

2VNJ | pdb_00002vnj

3EJB | pdb_00003ejb

3EJD | pdb_00003ejd

3EJE | pdb_00003eje

3OAX | pdb_00003oax

3PL9 | pdb_00003pl9

3WU2 | pdb_00003wu2

4BEM | pdb_00004bem

4IL6 | pdb_00004il6

4UB6 | pdb_00004ub6

4UB8 | pdb_00004ub8

4XK8 | pdb_00004xk8

5B5E | pdb_00005b5e

5B66 | pdb_00005b66

5GTH | pdb_00005gth

5GTI | pdb_00005gti