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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Canals, A."

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Vibrio cholerae (4)
	Homo sapiens (2)
	Escherichia coli (1)
	Escherichia coli K-12 (1)
	Methanocaldococcus jannaschii DSM 2661 (1)
	Mus musculus (1)
	Pyrococcus abyssi GE5 (1)
	Streptomyces halstedii (1)
	Thermotoga maritima (1)

Taxonomy

	Bacteria (7)
	Eukaryota (3)
	Archaea (2)

Experimental Method

X-RAY DIFFRACTION (14)

Polymer Entity Type

	Protein (12)
	DNA (7)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (5)
	2.0 - 2.5 (4)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (3)
	2005 - 2009 (1)
	2010 - 2014 (5)
	2015 - 2019 (1)
	2020 - 2024 (4)

Enzyme Classification Name

	Hydrolases (4)
	Lyases (2)
	Transferases (2)

Symmetry Type

	Asymmetric (7)
	Cyclic (5)

SCOP Classification

	Alpha and beta proteins (a+b) (2)
	Alpha and beta proteins (a/b) (3)
	All alpha proteins (1)
	All beta proteins (1)

AllSelected

1 to 14 of 14 Structures

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1DZA \| pdb_00001dza	Download File View File

3-D structure of a HP-RNase

Pous, J., Canals, A., Terzyan, S.S., Guasch, A., Benito, A., Ribo, M., Vilanova, M., Coll, M.

(2000) J Mol Biology 303: 49

Released	2001-02-16
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	RIBONUCLEASE 1 (protein)

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1H8X \| pdb_00001h8x	Download File View File

Domain-swapped Dimer of a Human Pancreatic Ribonuclease Variant

Canals, A., Pous, J., Guasch, A., Benito, A., Ribo, M., Vilanova, M., Coll, M.

(2001) Structure 9: 967

Released	2002-02-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	RIBONUCLEASE 1 (protein)

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1NQ6 \| pdb_00001nq6	Download File View File

Crystal Structure of the catalytic domain of xylanase A from Streptomyces halstedii JM8

Canals, A., Vega, M.C., Gomis-Ruth, F.X., Santamaria, R.I., Coll, M.

(2003) Acta Crystallogr D Biol Crystallogr 59: 1447-1453

Released	2004-01-21
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Streptomyces halstedii
Macromolecule	Xys1 (protein)
Unique Ligands	MG

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1Z3F \| pdb_00001z3f	Download File View File

Structure of ellipticine in complex with a 6-bp DNA

Canals, A., Purciolas, M., Aymami, J., Coll, M.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1009-1012

Released	2005-07-19
Method	X-RAY DIFFRACTION 1.5 Å
Macromolecule	5'-D(CPGPAPTPCPG)-3' (nucleic acid)
Unique Ligands	CO, EL

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3L0O \| pdb_00003l0o	Download File View File

Structure of RNA-free Rho transcription termination factor from Thermotoga maritima

Canals, A., Uson, I., Coll, M.

(2010) J Mol Biology 400: 16-23

Released	2010-05-26
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Thermotoga maritima
Macromolecule	Transcription termination factor rho (protein)
Unique Ligands	IUM, NA, SO4

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3O76 \| pdb_00003o76	Download File View File

1.8 Angstroms molecular structure of mouse liver glutathione S-transferase mutant C47A complexed with S-(P-nitrobenzyl)glutathione

Canals, A., Coll, M.

(2011) FEBS J 278: 273-281

Released	2011-06-15
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Mus musculus
Macromolecule	Glutathione S-transferase P 1 (protein)
Unique Ligands	GTB

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3T72 \| pdb_00003t72	Download File View File

PhoB(E)-Sigma70(4)-(RNAP-Betha-flap-tip-helix)-DNA Transcription Activation Sub-Complex

Blanco, A.G., Canals, A., Bernues, J., Sola, M., Coll, M.

(2011) EMBO J 30: 3776-3785

Released	2011-09-21
Method	X-RAY DIFFRACTION 4.33 Å
Organisms	Escherichia coli Escherichia coli K-12
Macromolecule	Phosphate regulon transcriptional regulatory protein phoB (protein) RNA polymerase sigma factor rpoD, DNA-directed RNA polymerase subunit beta (protein) PHO BOX DNA (STRAND 1) (nucleic acid) PHO BOX DNA (STRAND 2) (nucleic acid)

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4JIU \| pdb_00004jiu	Download File View File

Crystal structure of the metallopeptidase zymogen of Pyrococcus abyssi abylysin

Lopez-Pelegrin, M., Cerda-Costa, N., Martinez-Jimenez, F., Cintas-Pedrola, A., Canals, A., Peinado, J.R., Marti-Renom, M.A., Lopez-Otin, C., Arolas, J.L., Gomis-Ruth, F.X.

(2013) J Biological Chem 288: 21279-21294

Released	2013-06-12
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Pyrococcus abyssi GE5
Macromolecule	Proabylysin (protein)
Unique Ligands	GOL, ZN

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4JIX \| pdb_00004jix	Download File View File

Crystal structure of the metallopeptidase zymogen of Methanocaldococcus jannaschii jannalysin

Lopez-Pelegrin, M., Cerda-Costa, N., Martinez-Jimenez, F., Cintas-Pedrola, A., Canals, A., Peinado, J.R., Marti-Renom, M.A., Lopez-Otin, C., Arolas, J.L., Gomis-Ruth, F.X.

(2013) J Biological Chem 288: 21279-21294

Released	2013-06-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanocaldococcus jannaschii DSM 2661
Macromolecule	Projannalysin (protein)
Unique Ligands	CL, GOL, SO4, TRS, ZN

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4MNB \| pdb_00004mnb	Download File View File

Crystal Structure of a complex between the marine anticancer drug Variolin B and DNA

Canals, A., Arribas-Bosacoma, R., Alvarez, M., Albericio, F., Aymami, J., Coll, M.

(2017) Sci Rep 7: 39680-39680

Released	2015-03-11
Method	X-RAY DIFFRACTION 1.4 Å
Macromolecule	5'-D(CPGPTPAPCPG)-3' (nucleic acid)
Unique Ligands	CO, NA, NCO, VAR

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8B4B \| pdb_00008b4b	Download File View File

ToxR bacterial transcriptional regulator bound to 19 bp ompU promoter DNA

Canals, A., Pieretti, S., Muriel, M., El Yaman, N., Fabrega-Ferrer, M., Perez-Luque, R., Krukonis, E.S., Coll, M.

(2023) Proc Natl Acad Sci U S A 120: e2304378120-e2304378120

Released	2023-08-09
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Vibrio cholerae
Macromolecule	Cholera toxin transcriptional activator (protein) DNA (19-MER) (nucleic acid)
Unique Ligands	CD, NH4

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8B4C \| pdb_00008b4c	Download File View File

ToxR bacterial transcriptional regulator bound to 20 bp toxT promoter DNA

Canals, A., Pieretti, S., Muriel, M., El Yaman, N., Fabrega-Ferrer, M., Perez-Luque, R., Krukonis, E.S., Coll, M.

(2023) Proc Natl Acad Sci U S A 120: e2304378120-e2304378120

Released	2023-08-09
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Vibrio cholerae
Macromolecule	Cholera toxin transcriptional activator (protein) DNA (20-MER) (nucleic acid)

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8B4D \| pdb_00008b4d	Download File View File

ToxR bacterial transcriptional regulator bound to 40 bp toxT promoter DNA

Canals, A., Pieretti, S., Muriel, M., El Yaman, N., Fabrega-Ferrer, M., Perez-Luque, R., Krukonis, E.S., Coll, M.

(2023) Proc Natl Acad Sci U S A 120: e2304378120-e2304378120

Released	2023-08-09
Method	X-RAY DIFFRACTION 2.64 Å
Organisms	Vibrio cholerae
Macromolecule	Cholera toxin transcriptional activator (protein) DNA (40-MER) (nucleic acid)

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8B4E \| pdb_00008b4e	Download File View File

ToxR bacterial transcriptional regulator bound to 25 bp toxT promoter DNA

Canals, A., Pieretti, S., Muriel, M., El Yaman, N., Fabrega-Ferrer, M., Perez-Luque, R., Krukonis, E.S., Coll, M.

(2023) Proc Natl Acad Sci U S A 120: e2304378120-e2304378120

Released	2023-08-09
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Vibrio cholerae
Macromolecule	Cholera toxin transcriptional activator (protein) DNA (25-MER) (nucleic acid)

1 to 14 of 14 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1DZA | pdb_00001dza

3-D structure of a HP-RNase

1H8X | pdb_00001h8x

Domain-swapped Dimer of a Human Pancreatic Ribonuclease Variant

1NQ6 | pdb_00001nq6

Crystal Structure of the catalytic domain of xylanase A from Streptomyces halstedii JM8

1Z3F | pdb_00001z3f

Structure of ellipticine in complex with a 6-bp DNA

3L0O | pdb_00003l0o

Structure of RNA-free Rho transcription termination factor from Thermotoga maritima

3O76 | pdb_00003o76

1.8 Angstroms molecular structure of mouse liver glutathione S-transferase mutant C47A complexed with S-(P-nitrobenzyl)glutathione

3T72 | pdb_00003t72

PhoB(E)-Sigma70(4)-(RNAP-Betha-flap-tip-helix)-DNA Transcription Activation Sub-Complex

4JIU | pdb_00004jiu

Crystal structure of the metallopeptidase zymogen of Pyrococcus abyssi abylysin

4JIX | pdb_00004jix

Crystal structure of the metallopeptidase zymogen of Methanocaldococcus jannaschii jannalysin

4MNB | pdb_00004mnb

Crystal Structure of a complex between the marine anticancer drug Variolin B and DNA

8B4B | pdb_00008b4b

ToxR bacterial transcriptional regulator bound to 19 bp ompU promoter DNA

8B4C | pdb_00008b4c

ToxR bacterial transcriptional regulator bound to 20 bp toxT promoter DNA

8B4D | pdb_00008b4d

ToxR bacterial transcriptional regulator bound to 40 bp toxT promoter DNA

8B4E | pdb_00008b4e

ToxR bacterial transcriptional regulator bound to 25 bp toxT promoter DNA

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1DZA | pdb_00001dza

1H8X | pdb_00001h8x

1NQ6 | pdb_00001nq6

1Z3F | pdb_00001z3f

3L0O | pdb_00003l0o

3O76 | pdb_00003o76

3T72 | pdb_00003t72

4JIU | pdb_00004jiu

4JIX | pdb_00004jix

4MNB | pdb_00004mnb

8B4B | pdb_00008b4b

8B4C | pdb_00008b4c

8B4D | pdb_00008b4d

8B4E | pdb_00008b4e