RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Huegin, D."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Canis lupus familiaris (6)
	Homo sapiens (2)
	Mus musculus (2)
	Agriosphodrus dohrni (1)
	Paenibacillus lautus NBRC 15380 (1)
	Saccharomyces cerevisiae S288C (1)

Taxonomy

	Eukaryota (10)
	Bacteria (1)

Experimental Method

	X-RAY DIFFRACTION (9)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (3)
	2.0 - 2.5 (1)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (1)
	2010 - 2014 (1)
	2015 - 2019 (1)
	2020 - 2024 (7)

Enzyme Classification Name

	Hydrolases (2)
	Oxidoreductases (6)

Symmetry Type

	Cyclic (8)
	Asymmetric (3)

SCOP Classification

	Alpha and beta proteins (a+b) (1)
	All beta proteins (1)
	Small proteins (1)

AllSelected

1 to 11 of 11 Structures

Page 1 of 1

Sort by

Explore in 3D

1LMR \| pdb_00001lmr	Download File View File

Solution of ADO1, a Toxin from the Assassin Bugs Agriosphodrus dohrni that Blocks the Voltage Sensitive Calcium Channel L-type

Bernard, C., Corzo, G., Adachi-Akahane, S., Foures, G., Kanemaru, K., Furukawa, Y., Nakajima, T., Darbon, H.

(2004) Proteins 54: 195-205

Released	2003-08-19
Method	SOLUTION NMR
Organisms	Agriosphodrus dohrni
Macromolecule	TOXIN ADO1 (protein)

Explore in 3D

2YRN \| pdb_00002yrn	Download File View File

Solution structure of the CH domain from Human Neuron navigator 2

Tomizawa, T., Tochio, N., Koshiba, S., Inoue, M., Nakamura, Y., Furukawa, Y., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2008-02-12
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Neuron navigator 2 isoform 4 (protein)

Explore in 3D

4EU2 \| pdb_00004eu2	Download File View File

Crystal structure of 20s proteasome with novel inhibitor K-7174

Kikuchi, J., Shibayama, N., Yamada, S., Wada, T., Nobuyoshi, M., Izumi, T., Akutsu, M., Kano, Y., Ohki, M., Sugiyama, K., Park, S.-Y., Furukawa, Y.

(2013) PLoS One 8: e60649-e60649

Released	2013-05-01
Method	X-RAY DIFFRACTION 2.509 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Unique protein chains: 14
Unique Ligands	WPI

Explore in 3D

5ZLQ \| pdb_00005zlq	Download File View File

Crystal Structure of C1orf123

Furukawa, Y., Lim, C.T., Tosha, T.

(2018) PLoS One 13: e0204355-e0204355

Released	2018-10-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	UPF0587 protein C1orf123 (protein)
Unique Ligands	ZN

Explore in 3D

7WWT \| pdb_00007wwt	Download File View File

Cu/Zn-superoxide dismutase from dog (Canis familiaris)

Narikiyo, S., Furukawa, Y., Akutsu, M.

(2023) J Biological Chem 299: 104798-104798

Released	2023-02-15
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Canis lupus familiaris
Macromolecule	Superoxide dismutase [Cu-Zn] (protein)
Unique Ligands	CU, ZN

Explore in 3D

7WWY \| pdb_00007wwy	Download File View File

M117L variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)

Narikiyo, S., Furukawa, Y., Akutsu, M.

(2023) J Biological Chem 299: 104798-104798

Released	2023-02-15
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Canis lupus familiaris
Macromolecule	Superoxide dismutase [Cu-Zn] (protein)
Unique Ligands	CU, ZN

Explore in 3D

7WX0 \| pdb_00007wx0	Download File View File

E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)

Narikiyo, S., Furukawa, Y., Akutsu, M.

(2023) J Biological Chem 299: 104798-104798

Released	2023-02-15
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Canis lupus familiaris
Macromolecule	Superoxide dismutase [Cu-Zn] (protein)
Unique Ligands	CU, ZN

Explore in 3D

7WX1 \| pdb_00007wx1	Download File View File

E40K/M117L variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)

Narikiyo, S., Furukawa, Y., Akutsu, M.

(2023) J Biological Chem 299: 104798-104798

Released	2023-02-15
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Canis lupus familiaris
Macromolecule	Superoxide dismutase [Cu-Zn] (protein)
Unique Ligands	CU, ZN

Explore in 3D

8IMD \| pdb_00008imd	Download File View File

Crystal structure of Cu/Zn Superoxide dismutase from Paenibacillus lautus

Narikiyo, S., Furukawa, Y., Akutsu, M.

(2023) J Biological Chem 299: 105040-105040

Released	2024-01-17
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Paenibacillus lautus NBRC 15380
Macromolecule	Cu/Zn-Superoxide dismutase (protein)
Unique Ligands	CU, MES, ZN

Explore in 3D

8ZD5 \| pdb_00008zd5	Download File View File

Crystal structure of E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris) in the holo form complexed with 22E1 Fv-clasp

Shino, Y., Furukawa, Y., Muraki, N.

(2024) Protein Sci 33: e5210-e5210

Released	2024-11-27
Method	X-RAY DIFFRACTION 2.89 Å
Organisms	Canis lupus familiaris Mus musculus
Macromolecule	22E1VH-SARAH (protein) 22E1VL-SARAH (protein) Superoxide dismutase [Cu-Zn] (protein)
Unique Ligands	CU, ZN

Explore in 3D

8ZD6 \| pdb_00008zd6	Download File View File

Crystal structure of E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris) in the apo form complexed with 22E1 Fv-clasp

Shino, Y., Furukawa, Y., Muraki, N.

(2024) Protein Sci 33: e5210-e5210

Released	2024-11-27
Method	X-RAY DIFFRACTION 3.29 Å
Organisms	Canis lupus familiaris Mus musculus
Macromolecule	22E1VH-SARAH (protein) 22E1VL-SARAH (protein) Superoxide dismutase [Cu-Zn] (protein)

1 to 11 of 11 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1LMR | pdb_00001lmr

Solution of ADO1, a Toxin from the Assassin Bugs Agriosphodrus dohrni that Blocks the Voltage Sensitive Calcium Channel L-type

2YRN | pdb_00002yrn

Solution structure of the CH domain from Human Neuron navigator 2

4EU2 | pdb_00004eu2

Crystal structure of 20s proteasome with novel inhibitor K-7174

5ZLQ | pdb_00005zlq

Crystal Structure of C1orf123

7WWT | pdb_00007wwt

Cu/Zn-superoxide dismutase from dog (Canis familiaris)

7WWY | pdb_00007wwy

M117L variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)

7WX0 | pdb_00007wx0

E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)

7WX1 | pdb_00007wx1

E40K/M117L variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)

8IMD | pdb_00008imd

Crystal structure of Cu/Zn Superoxide dismutase from Paenibacillus lautus

8ZD5 | pdb_00008zd5

Crystal structure of E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris) in the holo form complexed with 22E1 Fv-clasp

8ZD6 | pdb_00008zd6

Crystal structure of E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris) in the apo form complexed with 22E1 Fv-clasp

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1LMR | pdb_00001lmr

2YRN | pdb_00002yrn

4EU2 | pdb_00004eu2

5ZLQ | pdb_00005zlq

7WWT | pdb_00007wwt

7WWY | pdb_00007wwy

7WX0 | pdb_00007wx0

7WX1 | pdb_00007wx1

8IMD | pdb_00008imd

8ZD5 | pdb_00008zd5

8ZD6 | pdb_00008zd6