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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Lappalainen, P."

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Search Summary

This query matches 27 Structures.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

	Mus musculus (9)
	Homo sapiens (6)
	Oryctolagus cuniculus (5)
	Leishmania major (4)
	Saccharomyces cerevisiae (4)
	Escherichia coli (2)
	Borrelia nietonii YOR (1)
	Dictyostelium discoideum (1)
	Gallus gallus (1)

Taxonomy

	Eukaryota (25)
	Bacteria (3)

Experimental Method

	X-RAY DIFFRACTION (20)
	ELECTRON MICROSCOPY (5)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (27)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (11)
	2.5 - 3.0 (6)
	3.0 - 3.5 (3)
	3.5 - 4.0 (1)
	> 4.5 (1)

Release Date

	1995 - 1999 (5)
	2000 - 2004 (3)
	2005 - 2009 (2)
	2010 - 2014 (3)
	2015 - 2019 (6)
	2020 - 2024 (8)

Enzyme Classification Name

	Hydrolases (11)
	Oxidoreductases (2)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (16)
	Cyclic (8)
	Helical (5)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (10)
	All alpha proteins (3)
	Alpha and beta proteins (a/b) (7)
	Artifacts (2)
	All beta proteins (3)

AllSelected

1 to 25 of 27 Structures

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1CFY \| pdb_00001cfy	Download File View File

YEAST COFILIN, MONOCLINIC CRYSTAL FORM

Fedorov, A.A., Lappalainen, P., Fedorov, E.V., Drubin, D.G., Almo, S.C.

(1997) Nat Struct Biol 4: 366-369

Released	1997-04-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	COFILIN (protein)

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1COF \| pdb_00001cof	Download File View File

YEAST COFILIN, ORTHORHOMBIC CRYSTAL FORM

Fedorov, A.A., Lappalainen, P., Fedorov, E.V., Drubin, D.G., Almo, S.C.

(1997) Nat Struct Biol 4: 366-369

Released	1997-04-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	COFILIN (protein)

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1CYW \| pdb_00001cyw	Download File View File

QUINOL OXIDASE (PERIPLASMIC FRAGMENT OF SUBUNIT II) (CYOA)

Wilmanns, M., Lappalainen, P., Kelly, M., Sauer-Eriksson, E., Saraste, M.

(1995) Proc Natl Acad Sci U S A 92: 11955-11959

Released	1996-03-08
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	CYOA (protein)

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1CYX \| pdb_00001cyx	Download File View File

QUINOL OXIDASE (PERIPLASMIC FRAGMENT OF SUBUNIT II WITH ENGINEERED CU-A BINDING SITE)(CYOA)

Wilmanns, M., Lappalainen, P., Kelly, M., Sauer-Eriksson, E., Saraste, M.

(1995) Proc Natl Acad Sci U S A 92: 11955-11959

Released	1996-03-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	CYOA (protein)
Unique Ligands	CUA

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1HQZ \| pdb_00001hqz	Download File View File

Cofilin homology domain of a yeast actin-binding protein ABP1P

Strokopytov, B.V., Fedorov, A.A., Mahoney, N., Drubin, D.G., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2005) Acta Crystallogr D Biol Crystallogr 61: 285-293

Released	2001-12-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ACTIN-BINDING PROTEIN (protein)

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1M4J \| pdb_00001m4j	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL ADF-H DOMAIN OF MOUSE TWINFILIN ISOFORM-1

Paavilainen, V.O., Merckel, M.C., Falck, S., Ojala, P.J., Pohl, E., Wilmanns, M., Lappalainen, P.

(2002) J Biological Chem 277: 43089-43095

Released	2002-11-13
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mus musculus
Macromolecule	A6 gene product (protein)

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1QPV \| pdb_00001qpv	Download File View File

YEAST COFILIN

Fedorov, A.A., Lappalainen, P., Fedorov, E.V., Drubin, D.G., Almo, S.C.

(1997) Nat Struct Biol 4: 366-369

Released	1999-06-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	YEAST COFILIN (protein)

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1WM4 \| pdb_00001wm4	Download File View File

Solution structure of mouse coactosin, an actin filament binding protein

Hellman, M., Paavilainen, V.O., Naumanen, P., Lappalainen, P., Annila, A., Permi, P.

(2004) FEBS Lett 576: 91-96

Released	2004-11-02
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	Coactosin-like protein (protein)

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2HD7 \| pdb_00002hd7	Download File View File

Solution structure of C-teminal domain of twinfilin-1.

Hellman, M.H., Paavilainen, V.O., Annila, A., Lappalainen, P., Permi, P.I.

(2007) Proc Natl Acad Sci U S A 104: 3113-3118

Released	2007-02-06
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	Twinfilin-1 (protein)

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3DAW \| pdb_00003daw	Download File View File

Structure of the actin-depolymerizing factor homology domain in complex with actin

Paavilainen, V.O., Oksanen, E., Goldman, A., Lappalainen, P.

(2008) J Cell Biol 182: 51-59

Released	2008-07-29
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Mus musculus Oryctolagus cuniculus
Macromolecule	Actin, alpha skeletal muscle (protein) Twinfilin-1 (protein)
Unique Ligands	ATP, CA

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3OK8 \| pdb_00003ok8	Download File View File

I-BAR OF PinkBAR

Boczkowska, M., Rebowski, G., Saarikangas, J., Lappalainen, P., Dominguez, R.

(2011) Nat Struct Mol Biol 18: 902-907

Released	2011-07-13
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mus musculus
Macromolecule	Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 (protein)
Unique Ligands	GOL

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4BNE \| pdb_00004bne	Download File View File

Pacsin2 Interacts with Membranes and Actin-Filaments

Kostan, J., Salzer, U., Orlova, A., Toeroe, I., Hodnik, V., Schreiner, C., Merilainen, J., Nikki, M., Virtanen, I., Lehto, V.-P., Anderluh, G., Egelman, E.H., Djinovic-Carugo, K.

(2014) EMBO Rep 15: 1154

Released	2014-05-14
Method	X-RAY DIFFRACTION 2.57 Å
Organisms	Gallus gallus
Macromolecule	PROTEIN KINASE C AND CASEIN KINASE SUBSTRATE IN NEURONS PROTEIN 2 (protein)
Unique Ligands	PGE, SO4

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4NQI \| pdb_00004nqi	Download File View File

Structure of the N-terminal I-BAR domain (1-259) of D.Discoideum IBARa

Witte, G., Faix, J., Runge-Wollmann, P.

(2014) J Cell Sci 127: 1279-1292

Released	2014-02-05
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Dictyostelium discoideum
Macromolecule	SH3 domain-containing protein (protein)
Unique Ligands	ACT, PEG

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4Z79 \| pdb_00004z79	Download File View File

Leiomodin-1 Actin-Binding Site 2 (ABS2)

Rebowski, G., Boczkowska, M., Dominguez, R.

(2015) Nat Commun 6: 8314-8314

Released	2015-10-21
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Homo sapiens
Macromolecule	Leiomodin-1 Actin-Binding Site 2 (ABS2) (protein)
Unique Ligands	CL, GOL, NA

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4Z8G \| pdb_00004z8g	Download File View File

Chimera of Tropomodulin-1 and Leiomodin-1 Actin-Binding Site 2 (TL1 ABS2)

Boczkowska, M., Rebowski, G., Dominguez, R.

(2015) Nat Commun 6: 8314-8314

Released	2015-10-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Tropomodulin-1, Leiomodin-1 chimera (TP1 ABS2) (protein)
Unique Ligands	NI

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4Z94 \| pdb_00004z94	Download File View File

Actin Complex With a Chimera of Tropomodulin-1 and Leiomodin-1 Actin-Binding Site 2

Rebowski, G., Boczkowska, M., Dominguez, R.

(2015) Nat Commun 6: 8314-8314

Released	2015-10-21
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens Oryctolagus cuniculus
Macromolecule	Actin, alpha skeletal muscle (protein) Gelsolin, Tropomodulin-1, Leiomodin-1 chimera (protein)
Unique Ligands	ATP, CA

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6FM2 \| pdb_00006fm2	Download File View File

CARP domain of mouse cyclase-associated protein 1 (CAP1) bound to ADP-actin

Kotila, T.M., Kogan, K., Lappalainen, P.

(2018) Nat Commun 9: 1892-1892

Released	2018-05-16
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus Oryctolagus cuniculus
Macromolecule	Actin, alpha skeletal muscle (protein) Adenylyl cyclase-associated protein 1 (protein)
Unique Ligands	ADP, MG

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6RSQ \| pdb_00006rsq	Download File View File

Helical folded domain of mouse CAP1

Kotila, T., Kogan, K., Lappalainen, P.

(2019) Nat Commun 10: 5320-5320

Released	2019-11-27
Method	X-RAY DIFFRACTION 2.37 Å
Organisms	Mus musculus
Macromolecule	Adenylyl cyclase-associated protein 1 (protein)
Unique Ligands	GOL

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6RSW \| pdb_00006rsw	Download File View File

HFD domain of mouse CAP1 bound to the pointed end of G-actin

Kotila, T., Kogan, K., Lappalainen, P.

(2019) Nat Commun 10: 5320-5320

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Mus musculus Oryctolagus cuniculus
Macromolecule	Actin, alpha skeletal muscle (protein) Adenylyl cyclase-associated protein 1 (protein) Twinfilin-1 (protein)
Unique Ligands	ADP, EPE, MG

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6YP9 \| pdb_00006yp9	Download File View File

Rabbit muscle actin in complex with ADF-H and ATP-ATTO-488

Kogan, K., Kotila, T., Lappalainen, P.

(2021) Nat Commun 12: 548-548

Released	2020-12-09
Method	X-RAY DIFFRACTION 2.564 Å
Organisms	Mus musculus Oryctolagus cuniculus
Macromolecule	Actin, alpha skeletal muscle (protein) Twinfilin-1 (protein)
Unique Ligands	ATP, CA

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6ZH1 \| pdb_00006zh1	Download File View File

Crystal structure of complex between FH19-20 and FhbA protein from Borrelia hermsii

Kogan, K., Kotila, T., Meri, T., Goldman, A.

(2022) PLoS Pathog 18: e1010338-e1010338

Released	2022-01-12
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Borrelia nietonii YOR Homo sapiens
Macromolecule	Complement factor H (protein) Factor H-binding protein A (protein)
Unique Ligands	EDO, SO4

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7Q8B \| pdb_00007q8b	Download File View File

Leishmania major actin filament in ADP-Pi state

Kotila, T., Muniyandi, S., Lappalainen, P., Huiskonen, J.T.

(2022) Nat Commun 13: 3442-3442

Released	2022-05-18
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Leishmania major
Macromolecule	Actin (protein)
Unique Ligands	ADP, MG, PO4

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7Q8C \| pdb_00007q8c	Download File View File

Leishmania major actin filament in ADP-state

Kotila, T., Muniyandi, S., Lappalainen, P., Huiskonen, J.T.

(2022) Nat Commun 13: 3442-3442

Released	2022-05-18
Method	ELECTRON MICROSCOPY 2.72 Å
Organisms	Leishmania major
Macromolecule	Actin (protein)
Unique Ligands	ADP, MG

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7Q8S \| pdb_00007q8s	Download File View File

Leishmania major ADP-actin filament decorated with Leishmania major cofilin

Kotila, T., Muniyandi, S., Lappalainen, P., Huiskonen, J.T.

(2022) Nat Commun 13: 3442-3442

Released	2022-05-18
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Leishmania major
Macromolecule	ADF/Cofilin (protein) Actin (protein)
Unique Ligands	ADP, MG

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7ZTC \| pdb_00007ztc	Download File View File

Non-muscle F-actin decorated with non-muscle tropomyosin 1.6

Selvaraj, M., Kokate, S., Kogan, K., Kotila, T., Kremneva, E., Lappalainen, P., Huiskonen, J.T.

(2023) Cell Rep 42: 111900-111900

Released	2023-01-11
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Homo sapiens
Macromolecule	Non-muscle tropomyosin 1.6 (protein) actin, cytoplasmic 1 (protein)
Unique Ligands	ADP

1 to 25 of 27 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1CFY | pdb_00001cfy

1COF | pdb_00001cof

1CYW | pdb_00001cyw

1CYX | pdb_00001cyx

1HQZ | pdb_00001hqz

1M4J | pdb_00001m4j

1QPV | pdb_00001qpv

1WM4 | pdb_00001wm4

2HD7 | pdb_00002hd7

3DAW | pdb_00003daw

3OK8 | pdb_00003ok8

4BNE | pdb_00004bne

4NQI | pdb_00004nqi

4Z79 | pdb_00004z79

4Z8G | pdb_00004z8g

4Z94 | pdb_00004z94

6FM2 | pdb_00006fm2

6RSQ | pdb_00006rsq

6RSW | pdb_00006rsw

6YP9 | pdb_00006yp9

6ZH1 | pdb_00006zh1

7Q8B | pdb_00007q8b

7Q8C | pdb_00007q8c

7Q8S | pdb_00007q8s

7ZTC | pdb_00007ztc